CorrMapper’s codebase is finally open

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The title says it all really.. I’ve submitted my thesis and the publication of CorrMapper is almost ready so there’s no reason to hold the code back any longer. Here it is. I’ll write a more detailed README so devs who want to contribute can find their way around the project more easily.

danielhomolaCorrMapper’s codebase is finally open

Science Flask: a web-app template for online scientific research tools

danielhomola Blog 1 Comment

Building CorrMapper was one of the hardest things I’ve ever done. I had no idea how many pieces I will need to fit together to turn my my bioinformatics pipeline into a functioning web-app. I learned a lot from it, and I wanted to save the pain and the steep learning curve for my fellow scientist colleagues, who might not want to …

danielhomolaScience Flask: a web-app template for online scientific research tools

CorrMapper is finally finished

danielhomola Blog 1 Comment

After 2.5 half years of work, CorrMapper is finished. In the past 6 months, I weeded out a lot of bugs and improved both network explorer with lots of features. The paper is in preparation and should be submitted in the coming weeks. I’ll make the source code available as soon as the paper is out. Until then, give it …

danielhomolaCorrMapper is finally finished

CorrMapper (main project of my phd) is ready(ish)

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My PhD is entitled: Integration and visualisation of clinical-metabolic datasets for medical-decision making. So after several initial projects, in the past 1.5 years I’ve been working on a general system for the integration, exploration and visualisation of complex biological datasets. The problem with such an ambitious and broad PhD title is that it can fragment your attention and you can quickly …

danielhomolaCorrMapper (main project of my phd) is ready(ish)